Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ddx54Q8K4L0 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm5303-201ENSMUST00000117943 1252 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm29310-201ENSMUST00000185468 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm21825-201ENSMUST00000185728 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm29109-201ENSMUST00000185895 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm21896-201ENSMUST00000186520 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm21873-201ENSMUST00000186728 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm21794-201ENSMUST00000187056 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm21880-201ENSMUST00000187275 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm21826-201ENSMUST00000187451 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm21198-201ENSMUST00000188393 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm21749-201ENSMUST00000189343 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm21901-201ENSMUST00000189568 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm29424-201ENSMUST00000189716 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm28599-201ENSMUST00000189838 694 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm21867-201ENSMUST00000189917 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm29269-201ENSMUST00000190087 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm21722-201ENSMUST00000190153 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm28423-201ENSMUST00000190701 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm21899-201ENSMUST00000190745 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm21910-201ENSMUST00000191163 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm21849-201ENSMUST00000191571 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm28678-201ENSMUST00000191593 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm20910-201ENSMUST00000193268 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm21871-201ENSMUST00000194621 696 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Gm9229-201ENSMUST00000222777 126 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 AC238811.3-201ENSMUST00000225422 709 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 AC149588.3-201ENSMUST00000227515 150 ntBASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx54Q8K4L0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Ddx54Q8K4L0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.58■□□□□ 0.73
Ddx54Q8K4L0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx54Q8K4L0 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Ddx54Q8K4L0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx54Q8K4L0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Ddx54Q8K4L0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx54Q8K4L0 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC19.58■□□□□ 0.72
Ddx54Q8K4L0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx54Q8K4L0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx54Q8K4L0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx54Q8K4L0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
Ddx54Q8K4L0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx54Q8K4L0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx54Q8K4L0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Gm19220-201ENSMUST00000222682 803 ntBASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx54Q8K4L0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx54Q8K4L0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx54Q8K4L0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx54Q8K4L0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ddx54Q8K4L0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx54Q8K4L0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC19.56■□□□□ 0.72
Ddx54Q8K4L0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms