Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn1Q8K445 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn1Q8K445 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.24□□□□□ -0.13
Clrn1Q8K445 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn1Q8K445 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn1Q8K445 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.24□□□□□ -0.13
Clrn1Q8K445 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.24□□□□□ -0.13
Clrn1Q8K445 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn1Q8K445 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn1Q8K445 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn1Q8K445 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Clrn1Q8K445 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Clrn1Q8K445 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn1Q8K445 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn1Q8K445 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn1Q8K445 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn1Q8K445 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.24□□□□□ -0.13
Clrn1Q8K445 Gm12350-201ENSMUST00000121208 462 ntBASIC14.24□□□□□ -0.13
Clrn1Q8K445 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Clrn1Q8K445 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn1Q8K445 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn1Q8K445 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn1Q8K445 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Clrn1Q8K445 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn1Q8K445 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn1Q8K445 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Clrn1Q8K445 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn1Q8K445 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clrn1Q8K445 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.24□□□□□ -0.13
Clrn1Q8K445 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.23□□□□□ -0.13
Clrn1Q8K445 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Gm4899-201ENSMUST00000178708 719 ntBASIC14.23□□□□□ -0.13
Clrn1Q8K445 Gm27628-201ENSMUST00000184911 107 ntBASIC14.23□□□□□ -0.13
Clrn1Q8K445 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.23□□□□□ -0.13
Clrn1Q8K445 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.23□□□□□ -0.13
Clrn1Q8K445 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.23□□□□□ -0.13
Clrn1Q8K445 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clrn1Q8K445 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.23□□□□□ -0.13
Clrn1Q8K445 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.22□□□□□ -0.13
Clrn1Q8K445 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Clrn1Q8K445 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.22□□□□□ -0.13
Clrn1Q8K445 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn1Q8K445 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Clrn1Q8K445 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn1Q8K445 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn1Q8K445 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Clrn1Q8K445 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Clrn1Q8K445 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Clrn1Q8K445 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms