Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Birc2-201ENSMUST00000054878 378 ntBASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Gm37153-201ENSMUST00000193637 231 ntBASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Gm43347-201ENSMUST00000200226 580 ntBASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cchcr1Q8K2I2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.83■□□□□ 0.45
Cchcr1Q8K2I2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cchcr1Q8K2I2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.83■□□□□ 0.45
Cchcr1Q8K2I2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cchcr1Q8K2I2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cchcr1Q8K2I2 Gm25990-201ENSMUST00000102440 86 ntBASIC17.83■□□□□ 0.44
Cchcr1Q8K2I2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.83■□□□□ 0.44
Cchcr1Q8K2I2 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.83■□□□□ 0.44
Cchcr1Q8K2I2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.83■□□□□ 0.44
Cchcr1Q8K2I2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.83■□□□□ 0.44
Cchcr1Q8K2I2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cchcr1Q8K2I2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cchcr1Q8K2I2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cchcr1Q8K2I2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.83■□□□□ 0.44
Cchcr1Q8K2I2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cchcr1Q8K2I2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cchcr1Q8K2I2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cchcr1Q8K2I2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cchcr1Q8K2I2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cchcr1Q8K2I2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cchcr1Q8K2I2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Gm21362-201ENSMUST00000194272 928 ntBASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Gm43767-201ENSMUST00000198933 381 ntBASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Cchcr1Q8K2I2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cchcr1Q8K2I2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms