Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clip4Q8CI96 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clip4Q8CI96 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clip4Q8CI96 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clip4Q8CI96 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clip4Q8CI96 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clip4Q8CI96 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.21■□□□□ 0.03
Clip4Q8CI96 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clip4Q8CI96 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clip4Q8CI96 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clip4Q8CI96 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clip4Q8CI96 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
Clip4Q8CI96 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Clip4Q8CI96 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clip4Q8CI96 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clip4Q8CI96 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Clip4Q8CI96 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clip4Q8CI96 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.21■□□□□ 0.03
Clip4Q8CI96 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Clip4Q8CI96 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clip4Q8CI96 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.21■□□□□ 0.03
Clip4Q8CI96 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.21■□□□□ 0.03
Clip4Q8CI96 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Clip4Q8CI96 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.21■□□□□ 0.03
Clip4Q8CI96 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.21■□□□□ 0.03
Clip4Q8CI96 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Clip4Q8CI96 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clip4Q8CI96 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Clip4Q8CI96 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Clip4Q8CI96 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Clip4Q8CI96 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Clip4Q8CI96 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Clip4Q8CI96 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.21■□□□□ 0.02
Clip4Q8CI96 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Clip4Q8CI96 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Clip4Q8CI96 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Clip4Q8CI96 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Clip4Q8CI96 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clip4Q8CI96 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Clip4Q8CI96 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Clip4Q8CI96 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.2■□□□□ 0.02
Clip4Q8CI96 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Clip4Q8CI96 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.2■□□□□ 0.02
Clip4Q8CI96 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clip4Q8CI96 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Clip4Q8CI96 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Clip4Q8CI96 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Clip4Q8CI96 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clip4Q8CI96 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clip4Q8CI96 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clip4Q8CI96 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clip4Q8CI96 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.2■□□□□ 0.02
Clip4Q8CI96 Gm6443-201ENSMUST00000203599 874 ntBASIC15.2■□□□□ 0.02
Clip4Q8CI96 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Clip4Q8CI96 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.2■□□□□ 0.02
Clip4Q8CI96 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clip4Q8CI96 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clip4Q8CI96 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clip4Q8CI96 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Clip4Q8CI96 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clip4Q8CI96 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Clip4Q8CI96 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Gm12350-201ENSMUST00000121208 462 ntBASIC15.19■□□□□ 0.02
Clip4Q8CI96 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clip4Q8CI96 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.19■□□□□ 0.02
Clip4Q8CI96 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clip4Q8CI96 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Clip4Q8CI96 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clip4Q8CI96 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clip4Q8CI96 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clip4Q8CI96 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clip4Q8CI96 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clip4Q8CI96 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Clip4Q8CI96 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Clip4Q8CI96 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clip4Q8CI96 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clip4Q8CI96 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Clip4Q8CI96 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Clip4Q8CI96 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Clip4Q8CI96 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms