Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rp1l1Q8CGM2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.44■□□□□ 0.06
Rp1l1Q8CGM2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.44■□□□□ 0.06
Rp1l1Q8CGM2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rp1l1Q8CGM2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Snora78-201ENSMUST00000158630 128 ntBASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Gm5279-201ENSMUST00000199575 745 ntBASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Olfr286-202ENSMUST00000205305 969 ntBASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.43■□□□□ 0.06
Rp1l1Q8CGM2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Gm17420-201ENSMUST00000164753 153 ntBASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Gm12585-201ENSMUST00000117307 290 ntBASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Gm27892-201ENSMUST00000185017 106 ntBASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Mir7654-201ENSMUST00000185082 70 ntBASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Gm2495-201ENSMUST00000191160 466 ntBASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rp1l1Q8CGM2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Mir1247-201ENSMUST00000116706 82 ntBASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Mir1982-201ENSMUST00000157368 74 ntBASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Gm28911-201ENSMUST00000188837 117 ntBASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rp1l1Q8CGM2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rp1l1Q8CGM2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms