Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc38Q8CDN8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc38Q8CDN8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc38Q8CDN8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc38Q8CDN8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc38Q8CDN8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc38Q8CDN8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc38Q8CDN8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ccdc38Q8CDN8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Ccdc38Q8CDN8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc38Q8CDN8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc38Q8CDN8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.77■□□□□ 0.28
Ccdc38Q8CDN8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc38Q8CDN8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc38Q8CDN8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.77■□□□□ 0.28
Ccdc38Q8CDN8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc38Q8CDN8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc38Q8CDN8 Gm5682-201ENSMUST00000173402 505 ntBASIC16.77■□□□□ 0.28
Ccdc38Q8CDN8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ccdc38Q8CDN8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc38Q8CDN8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc38Q8CDN8 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc38Q8CDN8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc38Q8CDN8 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc38Q8CDN8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc38Q8CDN8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc38Q8CDN8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc38Q8CDN8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.27
Ccdc38Q8CDN8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc38Q8CDN8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc38Q8CDN8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc38Q8CDN8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc38Q8CDN8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc38Q8CDN8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc38Q8CDN8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc38Q8CDN8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc38Q8CDN8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc38Q8CDN8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc38Q8CDN8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.76■□□□□ 0.27
Ccdc38Q8CDN8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.76■□□□□ 0.27
Ccdc38Q8CDN8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc38Q8CDN8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.76■□□□□ 0.27
Ccdc38Q8CDN8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc38Q8CDN8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ccdc38Q8CDN8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc38Q8CDN8 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.76■□□□□ 0.27
Ccdc38Q8CDN8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Rubie-203ENSMUST00000227803 2430 ntBASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc38Q8CDN8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.74■□□□□ 0.27
Ccdc38Q8CDN8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms