Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp20Q8C6M1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp20Q8C6M1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp20Q8C6M1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp20Q8C6M1 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.66■□□□□ 0.26
Usp20Q8C6M1 Gm20949-201ENSMUST00000206478 952 ntBASIC16.66■□□□□ 0.26
Usp20Q8C6M1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp20Q8C6M1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp20Q8C6M1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp20Q8C6M1 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp20Q8C6M1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp20Q8C6M1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp20Q8C6M1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp20Q8C6M1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp20Q8C6M1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Usp20Q8C6M1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Usp20Q8C6M1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp20Q8C6M1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Usp20Q8C6M1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Mir449b-201ENSMUST00000104833 80 ntBASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Gm18057-201ENSMUST00000208220 503 ntBASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Usp20Q8C6M1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Usp20Q8C6M1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
Usp20Q8C6M1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Usp20Q8C6M1 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp20Q8C6M1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp20Q8C6M1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp20Q8C6M1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp20Q8C6M1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Usp20Q8C6M1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.64■□□□□ 0.25
Usp20Q8C6M1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp20Q8C6M1 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.64■□□□□ 0.25
Usp20Q8C6M1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Usp20Q8C6M1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Usp20Q8C6M1 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.64■□□□□ 0.25
Usp20Q8C6M1 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.64■□□□□ 0.25
Usp20Q8C6M1 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp20Q8C6M1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.64■□□□□ 0.25
Usp20Q8C6M1 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.64■□□□□ 0.25
Usp20Q8C6M1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp20Q8C6M1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Usp20Q8C6M1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.64■□□□□ 0.25
Usp20Q8C6M1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp20Q8C6M1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Usp20Q8C6M1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp20Q8C6M1 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.63■□□□□ 0.25
Usp20Q8C6M1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp20Q8C6M1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp20Q8C6M1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp20Q8C6M1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Usp20Q8C6M1 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.63■□□□□ 0.25
Usp20Q8C6M1 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.63■□□□□ 0.25
Usp20Q8C6M1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp20Q8C6M1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp20Q8C6M1 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp20Q8C6M1 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp20Q8C6M1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp20Q8C6M1 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp20Q8C6M1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp20Q8C6M1 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp20Q8C6M1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.63■□□□□ 0.25
Usp20Q8C6M1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp20Q8C6M1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Usp20Q8C6M1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp20Q8C6M1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp20Q8C6M1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp20Q8C6M1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp20Q8C6M1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp20Q8C6M1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.62■□□□□ 0.25
Usp20Q8C6M1 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.62■□□□□ 0.25
Usp20Q8C6M1 Gm22175-201ENSMUST00000175007 78 ntBASIC16.62■□□□□ 0.25
Usp20Q8C6M1 Gm7774-201ENSMUST00000200064 533 ntBASIC16.62■□□□□ 0.25
Usp20Q8C6M1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms