Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne1Q8C166 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.11□□□□□ -0.15
Cpne1Q8C166 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne1Q8C166 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne1Q8C166 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.1□□□□□ -0.15
Cpne1Q8C166 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cpne1Q8C166 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne1Q8C166 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne1Q8C166 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne1Q8C166 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne1Q8C166 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne1Q8C166 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne1Q8C166 Gm1401-201ENSMUST00000122048 772 ntBASIC14.1□□□□□ -0.15
Cpne1Q8C166 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.1□□□□□ -0.15
Cpne1Q8C166 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.1□□□□□ -0.15
Cpne1Q8C166 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne1Q8C166 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.1□□□□□ -0.15
Cpne1Q8C166 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.1□□□□□ -0.15
Cpne1Q8C166 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.1□□□□□ -0.15
Cpne1Q8C166 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.1□□□□□ -0.15
Cpne1Q8C166 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.1□□□□□ -0.15
Cpne1Q8C166 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne1Q8C166 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne1Q8C166 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne1Q8C166 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne1Q8C166 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.1□□□□□ -0.15
Cpne1Q8C166 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne1Q8C166 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne1Q8C166 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne1Q8C166 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne1Q8C166 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cpne1Q8C166 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne1Q8C166 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne1Q8C166 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne1Q8C166 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.1□□□□□ -0.15
Cpne1Q8C166 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne1Q8C166 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.09□□□□□ -0.15
Cpne1Q8C166 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.09□□□□□ -0.15
Cpne1Q8C166 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne1Q8C166 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cpne1Q8C166 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.08□□□□□ -0.15
Cpne1Q8C166 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cpne1Q8C166 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cpne1Q8C166 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cpne1Q8C166 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.08□□□□□ -0.15
Cpne1Q8C166 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cpne1Q8C166 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cpne1Q8C166 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne1Q8C166 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne1Q8C166 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne1Q8C166 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne1Q8C166 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne1Q8C166 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne1Q8C166 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.08□□□□□ -0.16
Cpne1Q8C166 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne1Q8C166 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Cpne1Q8C166 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.08□□□□□ -0.16
Cpne1Q8C166 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.08□□□□□ -0.16
Cpne1Q8C166 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne1Q8C166 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne1Q8C166 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne1Q8C166 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne1Q8C166 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.08□□□□□ -0.16
Cpne1Q8C166 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne1Q8C166 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne1Q8C166 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne1Q8C166 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cpne1Q8C166 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms