Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Gm16198-201ENSMUST00000118766 670 ntBASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Thap2-203ENSMUST00000218989 527 ntBASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nek11Q8C0Q4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nek11Q8C0Q4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Nek11Q8C0Q4 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.84■□□□□ 0.45
Nek11Q8C0Q4 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nek11Q8C0Q4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.84■□□□□ 0.45
Nek11Q8C0Q4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
Nek11Q8C0Q4 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.84■□□□□ 0.45
Nek11Q8C0Q4 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.84■□□□□ 0.45
Nek11Q8C0Q4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nek11Q8C0Q4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.84■□□□□ 0.45
Nek11Q8C0Q4 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nek11Q8C0Q4 Gm45747-201ENSMUST00000212203 999 ntBASIC17.84■□□□□ 0.45
Nek11Q8C0Q4 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nek11Q8C0Q4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nek11Q8C0Q4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nek11Q8C0Q4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Nek11Q8C0Q4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nek11Q8C0Q4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Nek11Q8C0Q4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nek11Q8C0Q4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.83■□□□□ 0.45
Nek11Q8C0Q4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nek11Q8C0Q4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nek11Q8C0Q4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nek11Q8C0Q4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nek11Q8C0Q4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nek11Q8C0Q4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nek11Q8C0Q4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Efs-202ENSMUST00000227037 2540 ntBASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Nek11Q8C0Q4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nek11Q8C0Q4 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms