Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trub1Q8C0D0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trub1Q8C0D0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.54■□□□□ 0.08
Trub1Q8C0D0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.54■□□□□ 0.08
Trub1Q8C0D0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trub1Q8C0D0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trub1Q8C0D0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trub1Q8C0D0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trub1Q8C0D0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trub1Q8C0D0 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.53■□□□□ 0.08
Trub1Q8C0D0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.53■□□□□ 0.08
Trub1Q8C0D0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trub1Q8C0D0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trub1Q8C0D0 Gm27741-201ENSMUST00000185060 237 ntBASIC15.53■□□□□ 0.08
Trub1Q8C0D0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.53■□□□□ 0.08
Trub1Q8C0D0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trub1Q8C0D0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trub1Q8C0D0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trub1Q8C0D0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.53■□□□□ 0.08
Trub1Q8C0D0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.53■□□□□ 0.08
Trub1Q8C0D0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trub1Q8C0D0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trub1Q8C0D0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trub1Q8C0D0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trub1Q8C0D0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trub1Q8C0D0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trub1Q8C0D0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trub1Q8C0D0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trub1Q8C0D0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trub1Q8C0D0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trub1Q8C0D0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trub1Q8C0D0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trub1Q8C0D0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trub1Q8C0D0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms