Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Gm27867-201ENSMUST00000184778 125 ntBASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Ank2-226ENSMUST00000189368 339 ntBASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ckap4Q8BMK4 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Efs-202ENSMUST00000227037 2540 ntBASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Gm12644-201ENSMUST00000119935 606 ntBASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ckap4Q8BMK4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.28□□□□□ -0.12
Ckap4Q8BMK4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ckap4Q8BMK4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.28□□□□□ -0.12
Ckap4Q8BMK4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.28□□□□□ -0.12
Ckap4Q8BMK4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.28□□□□□ -0.12
Ckap4Q8BMK4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.28□□□□□ -0.12
Ckap4Q8BMK4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.28□□□□□ -0.12
Ckap4Q8BMK4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ckap4Q8BMK4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ckap4Q8BMK4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ckap4Q8BMK4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ckap4Q8BMK4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Ckap4Q8BMK4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ckap4Q8BMK4 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms