Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col16a1Q8BLX7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col16a1Q8BLX7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Col16a1Q8BLX7 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col16a1Q8BLX7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Col16a1Q8BLX7 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col16a1Q8BLX7 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC19.52■□□□□ 0.71
Col16a1Q8BLX7 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC19.52■□□□□ 0.71
Col16a1Q8BLX7 Gm6007-201ENSMUST00000208170 823 ntBASIC19.52■□□□□ 0.71
Col16a1Q8BLX7 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Col16a1Q8BLX7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.52■□□□□ 0.71
Col16a1Q8BLX7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Col16a1Q8BLX7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col16a1Q8BLX7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col16a1Q8BLX7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col16a1Q8BLX7 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Col16a1Q8BLX7 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col16a1Q8BLX7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col16a1Q8BLX7 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col16a1Q8BLX7 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC19.51■□□□□ 0.71
Col16a1Q8BLX7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col16a1Q8BLX7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col16a1Q8BLX7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col16a1Q8BLX7 Gm15678-201ENSMUST00000117573 960 ntBASIC19.51■□□□□ 0.71
Col16a1Q8BLX7 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Col16a1Q8BLX7 Gm5035-201ENSMUST00000215581 927 ntBASIC19.51■□□□□ 0.71
Col16a1Q8BLX7 AC153962.4-201ENSMUST00000217878 242 ntBASIC19.51■□□□□ 0.71
Col16a1Q8BLX7 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Col16a1Q8BLX7 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Col16a1Q8BLX7 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col16a1Q8BLX7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col16a1Q8BLX7 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col16a1Q8BLX7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col16a1Q8BLX7 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col16a1Q8BLX7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col16a1Q8BLX7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC19.5■□□□□ 0.71
Col16a1Q8BLX7 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC19.5■□□□□ 0.71
Col16a1Q8BLX7 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col16a1Q8BLX7 Mir1938-201ENSMUST00000158746 100 ntBASIC19.5■□□□□ 0.71
Col16a1Q8BLX7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Col16a1Q8BLX7 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col16a1Q8BLX7 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col16a1Q8BLX7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC19.5■□□□□ 0.71
Col16a1Q8BLX7 AC238811.3-201ENSMUST00000225422 709 ntBASIC19.5■□□□□ 0.71
Col16a1Q8BLX7 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col16a1Q8BLX7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
Col16a1Q8BLX7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col16a1Q8BLX7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col16a1Q8BLX7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Col16a1Q8BLX7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col16a1Q8BLX7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col16a1Q8BLX7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col16a1Q8BLX7 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col16a1Q8BLX7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.5■□□□□ 0.71
Col16a1Q8BLX7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Gm11918-201ENSMUST00000121660 179 ntBASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Mir125a-201ENSMUST00000083545 68 ntBASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col16a1Q8BLX7 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Col16a1Q8BLX7 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col16a1Q8BLX7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col16a1Q8BLX7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col16a1Q8BLX7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.48■□□□□ 0.71
Col16a1Q8BLX7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col16a1Q8BLX7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col16a1Q8BLX7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col16a1Q8BLX7 BC001981-202ENSMUST00000191393 1545 ntBASIC19.48■□□□□ 0.71
Col16a1Q8BLX7 Gm21009-201ENSMUST00000197169 1669 ntBASIC19.48■□□□□ 0.71
Col16a1Q8BLX7 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col16a1Q8BLX7 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC19.48■□□□□ 0.71
Col16a1Q8BLX7 Gm9726-201ENSMUST00000180321 678 ntBASIC19.48■□□□□ 0.71
Col16a1Q8BLX7 AY702102-202ENSMUST00000194651 1173 ntBASIC19.48■□□□□ 0.71
Col16a1Q8BLX7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col16a1Q8BLX7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col16a1Q8BLX7 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col16a1Q8BLX7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms