Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Gm27704-201ENSMUST00000185094 107 ntBASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdhr3Q8BL00 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Gm15372-201ENSMUST00000120729 834 ntBASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdhr3Q8BL00 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms