Protein–RNA interactions for Protein: Q8BKN5

Tubgcp5, Gamma-tubulin complex component 5, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp5Q8BKN5 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tubgcp5Q8BKN5 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.08■□□□□ 0
Tubgcp5Q8BKN5 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Tubgcp5Q8BKN5 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tubgcp5Q8BKN5 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Tubgcp5Q8BKN5 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tubgcp5Q8BKN5 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tubgcp5Q8BKN5 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tubgcp5Q8BKN5 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tubgcp5Q8BKN5 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Tubgcp5Q8BKN5 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.07■□□□□ 0
Tubgcp5Q8BKN5 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Gm15165-201ENSMUST00000118140 502 ntBASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tubgcp5Q8BKN5 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tubgcp5Q8BKN5 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tubgcp5Q8BKN5 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tubgcp5Q8BKN5 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tubgcp5Q8BKN5 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tubgcp5Q8BKN5 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tubgcp5Q8BKN5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Tubgcp5Q8BKN5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tubgcp5Q8BKN5 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Tubgcp5Q8BKN5 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Tubgcp5Q8BKN5 Gm15372-201ENSMUST00000120729 834 ntBASIC15.05■□□□□ -0
Tubgcp5Q8BKN5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Tubgcp5Q8BKN5 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Tubgcp5Q8BKN5 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.05■□□□□ -0
Tubgcp5Q8BKN5 Gm17807-201ENSMUST00000186869 298 ntBASIC15.05■□□□□ -0
Tubgcp5Q8BKN5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tubgcp5Q8BKN5 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tubgcp5Q8BKN5 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tubgcp5Q8BKN5 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tubgcp5Q8BKN5 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tubgcp5Q8BKN5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tubgcp5Q8BKN5 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Tubgcp5Q8BKN5 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tubgcp5Q8BKN5 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Tubgcp5Q8BKN5 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.05■□□□□ -0
Tubgcp5Q8BKN5 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tubgcp5Q8BKN5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms