Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nop53Q8BK35 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nop53Q8BK35 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.16■□□□□ 0.18
Nop53Q8BK35 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Nop53Q8BK35 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nop53Q8BK35 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Nop53Q8BK35 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nop53Q8BK35 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nop53Q8BK35 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.16■□□□□ 0.18
Nop53Q8BK35 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.16■□□□□ 0.18
Nop53Q8BK35 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nop53Q8BK35 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.16■□□□□ 0.18
Nop53Q8BK35 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.16■□□□□ 0.18
Nop53Q8BK35 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nop53Q8BK35 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.16■□□□□ 0.18
Nop53Q8BK35 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.16■□□□□ 0.18
Nop53Q8BK35 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nop53Q8BK35 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nop53Q8BK35 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nop53Q8BK35 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nop53Q8BK35 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nop53Q8BK35 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.16■□□□□ 0.18
Nop53Q8BK35 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nop53Q8BK35 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.16■□□□□ 0.18
Nop53Q8BK35 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nop53Q8BK35 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nop53Q8BK35 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nop53Q8BK35 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nop53Q8BK35 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.15■□□□□ 0.18
Nop53Q8BK35 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nop53Q8BK35 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nop53Q8BK35 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nop53Q8BK35 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nop53Q8BK35 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nop53Q8BK35 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nop53Q8BK35 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nop53Q8BK35 Gm43347-201ENSMUST00000200226 580 ntBASIC16.15■□□□□ 0.18
Nop53Q8BK35 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nop53Q8BK35 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Nop53Q8BK35 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.15■□□□□ 0.18
Nop53Q8BK35 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nop53Q8BK35 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nop53Q8BK35 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nop53Q8BK35 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nop53Q8BK35 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nop53Q8BK35 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nop53Q8BK35 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nop53Q8BK35 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nop53Q8BK35 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nop53Q8BK35 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nop53Q8BK35 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nop53Q8BK35 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nop53Q8BK35 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Nop53Q8BK35 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.14■□□□□ 0.17
Nop53Q8BK35 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nop53Q8BK35 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nop53Q8BK35 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.14■□□□□ 0.17
Nop53Q8BK35 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Gm28659-201ENSMUST00000188013 759 ntBASIC16.14■□□□□ 0.17
Nop53Q8BK35 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nop53Q8BK35 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nop53Q8BK35 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.13■□□□□ 0.17
Nop53Q8BK35 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nop53Q8BK35 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms