Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ccdc40Q8BI79 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ccdc40Q8BI79 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ccdc40Q8BI79 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ccdc40Q8BI79 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.77■□□□□ 0.11
Ccdc40Q8BI79 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
Ccdc40Q8BI79 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ccdc40Q8BI79 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ccdc40Q8BI79 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Gm4535-201ENSMUST00000182274 558 ntBASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Birc2-201ENSMUST00000054878 378 ntBASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Gm10355-201ENSMUST00000097146 517 ntBASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccdc40Q8BI79 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Gm34391-201ENSMUST00000203706 907 ntBASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.74■□□□□ 0.11
Ccdc40Q8BI79 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms