Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SynbQ8BI41 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.42□□□□□ -0.1
SynbQ8BI41 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SynbQ8BI41 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.41□□□□□ -0.1
SynbQ8BI41 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.41□□□□□ -0.1
SynbQ8BI41 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.41□□□□□ -0.1
SynbQ8BI41 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Gm9682-201ENSMUST00000197505 556 ntBASIC14.41□□□□□ -0.1
SynbQ8BI41 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
SynbQ8BI41 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SynbQ8BI41 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SynbQ8BI41 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.41□□□□□ -0.1
SynbQ8BI41 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SynbQ8BI41 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SynbQ8BI41 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SynbQ8BI41 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SynbQ8BI41 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SynbQ8BI41 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.4□□□□□ -0.1
SynbQ8BI41 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SynbQ8BI41 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.4□□□□□ -0.1
SynbQ8BI41 Sybu-209ENSMUST00000228639 4113 ntBASIC14.4□□□□□ -0.1
SynbQ8BI41 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SynbQ8BI41 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SynbQ8BI41 Gm27494-201ENSMUST00000184735 189 ntBASIC14.4□□□□□ -0.1
SynbQ8BI41 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.4□□□□□ -0.1
SynbQ8BI41 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.4□□□□□ -0.1
SynbQ8BI41 Gm44492-201ENSMUST00000197012 141 ntBASIC14.4□□□□□ -0.1
SynbQ8BI41 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.4□□□□□ -0.1
SynbQ8BI41 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SynbQ8BI41 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SynbQ8BI41 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.4□□□□□ -0.1
SynbQ8BI41 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.4□□□□□ -0.1
SynbQ8BI41 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SynbQ8BI41 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SynbQ8BI41 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SynbQ8BI41 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.4□□□□□ -0.1
SynbQ8BI41 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.4□□□□□ -0.1
SynbQ8BI41 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SynbQ8BI41 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SynbQ8BI41 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SynbQ8BI41 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SynbQ8BI41 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.4□□□□□ -0.1
SynbQ8BI41 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SynbQ8BI41 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SynbQ8BI41 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SynbQ8BI41 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.4□□□□□ -0.1
SynbQ8BI41 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SynbQ8BI41 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SynbQ8BI41 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SynbQ8BI41 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
SynbQ8BI41 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.39□□□□□ -0.11
SynbQ8BI41 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.39□□□□□ -0.11
SynbQ8BI41 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
SynbQ8BI41 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.39□□□□□ -0.11
SynbQ8BI41 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.39□□□□□ -0.11
SynbQ8BI41 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SynbQ8BI41 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms