Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Samm50Q8BGH2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Gm7230-201ENSMUST00000173026 815 ntBASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Gm6089-201ENSMUST00000197666 938 ntBASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Samm50Q8BGH2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Samm50Q8BGH2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Samm50Q8BGH2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Samm50Q8BGH2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Samm50Q8BGH2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Samm50Q8BGH2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Samm50Q8BGH2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.68■□□□□ 0.42
Samm50Q8BGH2 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.68■□□□□ 0.42
Samm50Q8BGH2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.68■□□□□ 0.42
Samm50Q8BGH2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Samm50Q8BGH2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Samm50Q8BGH2 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.68■□□□□ 0.42
Samm50Q8BGH2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Samm50Q8BGH2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Samm50Q8BGH2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Samm50Q8BGH2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Samm50Q8BGH2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Samm50Q8BGH2 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.68■□□□□ 0.42
Samm50Q8BGH2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Samm50Q8BGH2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Samm50Q8BGH2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Samm50Q8BGH2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Samm50Q8BGH2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Samm50Q8BGH2 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Samm50Q8BGH2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Samm50Q8BGH2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Samm50Q8BGH2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Samm50Q8BGH2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Samm50Q8BGH2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Samm50Q8BGH2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Samm50Q8BGH2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Samm50Q8BGH2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.66■□□□□ 0.42
Samm50Q8BGH2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Samm50Q8BGH2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Samm50Q8BGH2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Samm50Q8BGH2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Samm50Q8BGH2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Samm50Q8BGH2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Samm50Q8BGH2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Samm50Q8BGH2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Samm50Q8BGH2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Samm50Q8BGH2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Samm50Q8BGH2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Samm50Q8BGH2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Samm50Q8BGH2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Samm50Q8BGH2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Samm50Q8BGH2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Samm50Q8BGH2 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms