Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Atg4bQ8BGE6 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Atg4bQ8BGE6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atg4bQ8BGE6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Atg4bQ8BGE6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Atg4bQ8BGE6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atg4bQ8BGE6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Atg4bQ8BGE6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Atg4bQ8BGE6 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Atg4bQ8BGE6 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms