Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox21Q811W0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox21Q811W0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sox21Q811W0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.35□□□□□ -0.43
Sox21Q811W0 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.35□□□□□ -0.43
Sox21Q811W0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.35□□□□□ -0.43
Sox21Q811W0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.35□□□□□ -0.43
Sox21Q811W0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Sox21Q811W0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.35□□□□□ -0.43
Sox21Q811W0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox21Q811W0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
Sox21Q811W0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Sox21Q811W0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox21Q811W0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox21Q811W0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox21Q811W0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox21Q811W0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox21Q811W0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox21Q811W0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox21Q811W0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.35□□□□□ -0.43
Sox21Q811W0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox21Q811W0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox21Q811W0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox21Q811W0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox21Q811W0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox21Q811W0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox21Q811W0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox21Q811W0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Sox21Q811W0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.35□□□□□ -0.43
Sox21Q811W0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sox21Q811W0 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.34□□□□□ -0.43
Sox21Q811W0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sox21Q811W0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sox21Q811W0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Sox21Q811W0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox21Q811W0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sox21Q811W0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.34□□□□□ -0.43
Sox21Q811W0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.34□□□□□ -0.43
Sox21Q811W0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.34□□□□□ -0.43
Sox21Q811W0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sox21Q811W0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sox21Q811W0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox21Q811W0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox21Q811W0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Sox21Q811W0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox21Q811W0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox21Q811W0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox21Q811W0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.33□□□□□ -0.44
Sox21Q811W0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox21Q811W0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox21Q811W0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox21Q811W0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox21Q811W0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox21Q811W0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox21Q811W0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox21Q811W0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Sox21Q811W0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox21Q811W0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox21Q811W0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.33□□□□□ -0.44
Sox21Q811W0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sox21Q811W0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.33□□□□□ -0.44
Sox21Q811W0 Gm18246-201ENSMUST00000221023 728 ntBASIC12.33□□□□□ -0.44
Sox21Q811W0 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.33□□□□□ -0.44
Sox21Q811W0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox21Q811W0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox21Q811W0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox21Q811W0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox21Q811W0 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.33□□□□□ -0.44
Sox21Q811W0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox21Q811W0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox21Q811W0 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.33□□□□□ -0.44
Sox21Q811W0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox21Q811W0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox21Q811W0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sox21Q811W0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox21Q811W0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sox21Q811W0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms