Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ubp1Q811S7 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubp1Q811S7 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.88□□□□□ -0.03
Ubp1Q811S7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Ubp1Q811S7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Ubp1Q811S7 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubp1Q811S7 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ubp1Q811S7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubp1Q811S7 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.88□□□□□ -0.03
Ubp1Q811S7 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.88□□□□□ -0.03
Ubp1Q811S7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ubp1Q811S7 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubp1Q811S7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ubp1Q811S7 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubp1Q811S7 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubp1Q811S7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubp1Q811S7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ubp1Q811S7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubp1Q811S7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.88□□□□□ -0.03
Ubp1Q811S7 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ubp1Q811S7 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.87□□□□□ -0.03
Ubp1Q811S7 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Gm18246-201ENSMUST00000221023 728 ntBASIC14.87□□□□□ -0.03
Ubp1Q811S7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ubp1Q811S7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.87□□□□□ -0.03
Ubp1Q811S7 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.86□□□□□ -0.03
Ubp1Q811S7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubp1Q811S7 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ubp1Q811S7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Gm12260-201ENSMUST00000122447 411 ntBASIC14.85□□□□□ -0.03
Ubp1Q811S7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ubp1Q811S7 Gm27525-201ENSMUST00000184465 107 ntBASIC14.85□□□□□ -0.03
Ubp1Q811S7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms