Protein–RNA interactions for Protein: Q80ZI6

Lrsam1, E3 ubiquitin-protein ligase LRSAM1, mousemouse

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrsam1Q80ZI6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrsam1Q80ZI6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Lrsam1Q80ZI6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.4■□□□□ 0.22
Lrsam1Q80ZI6 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Lrsam1Q80ZI6 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrsam1Q80ZI6 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Lrsam1Q80ZI6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lrsam1Q80ZI6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.4■□□□□ 0.22
Lrsam1Q80ZI6 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lrsam1Q80ZI6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Lrsam1Q80ZI6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Lrsam1Q80ZI6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrsam1Q80ZI6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lrsam1Q80ZI6 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.4■□□□□ 0.22
Lrsam1Q80ZI6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrsam1Q80ZI6 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Lrsam1Q80ZI6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Lrsam1Q80ZI6 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Gm14057-201ENSMUST00000120631 482 ntBASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Mir5131-201ENSMUST00000175426 93 ntBASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lrsam1Q80ZI6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Gm12134-201ENSMUST00000122109 520 ntBASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lrsam1Q80ZI6 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Efs-202ENSMUST00000227037 2540 ntBASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lrsam1Q80ZI6 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lrsam1Q80ZI6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lrsam1Q80ZI6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lrsam1Q80ZI6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Lrsam1Q80ZI6 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Lrsam1Q80ZI6 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms