Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vrk1Q80X41 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Gm27430-201ENSMUST00000184585 107 ntBASIC14.39□□□□□ -0.11
Vrk1Q80X41 Mir7023-201ENSMUST00000185093 64 ntBASIC14.39□□□□□ -0.11
Vrk1Q80X41 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Gm44333-201ENSMUST00000197168 107 ntBASIC14.39□□□□□ -0.11
Vrk1Q80X41 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vrk1Q80X41 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vrk1Q80X41 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm22065-201ENSMUST00000103753 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm22066-201ENSMUST00000103761 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm24932-201ENSMUST00000103763 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm24115-201ENSMUST00000103799 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm22190-201ENSMUST00000103827 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm22191-201ENSMUST00000103831 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm24721-201ENSMUST00000103849 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm28018-201ENSMUST00000103869 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm26399-201ENSMUST00000103937 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.38□□□□□ -0.11
Vrk1Q80X41 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm24158-201ENSMUST00000175263 71 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm25349-201ENSMUST00000177728 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm23616-201ENSMUST00000177797 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm25871-201ENSMUST00000177816 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm24752-201ENSMUST00000178240 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm24496-201ENSMUST00000178287 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm25649-201ENSMUST00000178476 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm25548-201ENSMUST00000178681 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm23147-201ENSMUST00000178841 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm26095-201ENSMUST00000179270 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm22171-201ENSMUST00000179283 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm23936-201ENSMUST00000179354 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm22619-201ENSMUST00000179516 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm25255-201ENSMUST00000179579 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm24755-201ENSMUST00000179691 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm26506-201ENSMUST00000179692 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm25086-201ENSMUST00000179931 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm23243-201ENSMUST00000180047 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm24659-201ENSMUST00000180212 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm24169-201ENSMUST00000180244 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm23689-201ENSMUST00000180354 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm27359-201ENSMUST00000184153 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm27785-201ENSMUST00000184268 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm27466-201ENSMUST00000184396 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm27703-201ENSMUST00000184836 110 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm10253-201ENSMUST00000194270 940 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vrk1Q80X41 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.38□□□□□ -0.11
Vrk1Q80X41 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Vrk1Q80X41 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Vrk1Q80X41 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vrk1Q80X41 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vrk1Q80X41 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vrk1Q80X41 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vrk1Q80X41 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vrk1Q80X41 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vrk1Q80X41 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vrk1Q80X41 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.37□□□□□ -0.11
Vrk1Q80X41 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vrk1Q80X41 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms