Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Trim62Q80V85 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trim62Q80V85 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim62Q80V85 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim62Q80V85 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim62Q80V85 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim62Q80V85 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim62Q80V85 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim62Q80V85 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim62Q80V85 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.58■□□□□ 0.08
Trim62Q80V85 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim62Q80V85 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.57■□□□□ 0.08
Trim62Q80V85 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trim62Q80V85 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim62Q80V85 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.57■□□□□ 0.08
Trim62Q80V85 Sybu-209ENSMUST00000228639 4113 ntBASIC15.57■□□□□ 0.08
Trim62Q80V85 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim62Q80V85 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim62Q80V85 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim62Q80V85 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim62Q80V85 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim62Q80V85 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim62Q80V85 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.57■□□□□ 0.08
Trim62Q80V85 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim62Q80V85 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.57■□□□□ 0.08
Trim62Q80V85 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim62Q80V85 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim62Q80V85 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim62Q80V85 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.57■□□□□ 0.08
Trim62Q80V85 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Trim62Q80V85 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.57■□□□□ 0.08
Trim62Q80V85 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Trim62Q80V85 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trim62Q80V85 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trim62Q80V85 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.56■□□□□ 0.08
Trim62Q80V85 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 Gm44492-201ENSMUST00000197012 141 ntBASIC15.56■□□□□ 0.08
Trim62Q80V85 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.56■□□□□ 0.08
Trim62Q80V85 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.56■□□□□ 0.08
Trim62Q80V85 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 Gm10175-201ENSMUST00000086013 645 ntBASIC15.56■□□□□ 0.08
Trim62Q80V85 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
Trim62Q80V85 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Trim62Q80V85 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim62Q80V85 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim62Q80V85 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim62Q80V85 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim62Q80V85 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim62Q80V85 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim62Q80V85 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trim62Q80V85 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trim62Q80V85 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim62Q80V85 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim62Q80V85 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trim62Q80V85 Gm15427-201ENSMUST00000117288 531 ntBASIC15.55■□□□□ 0.08
Trim62Q80V85 Gm16198-201ENSMUST00000118766 670 ntBASIC15.55■□□□□ 0.08
Trim62Q80V85 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.55■□□□□ 0.08
Trim62Q80V85 Gm45747-201ENSMUST00000212203 999 ntBASIC15.55■□□□□ 0.08
Trim62Q80V85 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.55■□□□□ 0.08
Trim62Q80V85 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim62Q80V85 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim62Q80V85 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Trim62Q80V85 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim62Q80V85 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim62Q80V85 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim62Q80V85 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim62Q80V85 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim62Q80V85 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim62Q80V85 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim62Q80V85 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Trim62Q80V85 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim62Q80V85 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Trim62Q80V85 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim62Q80V85 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms