Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf38bQ80SY5 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf38bQ80SY5 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf38bQ80SY5 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf38bQ80SY5 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf38bQ80SY5 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf38bQ80SY5 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Prpf38bQ80SY5 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.76■□□□□ 0.11
Prpf38bQ80SY5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf38bQ80SY5 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf38bQ80SY5 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Prpf38bQ80SY5 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.76■□□□□ 0.11
Prpf38bQ80SY5 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf38bQ80SY5 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf38bQ80SY5 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.76■□□□□ 0.11
Prpf38bQ80SY5 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Gm18889-201ENSMUST00000174284 929 ntBASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Gm7787-201ENSMUST00000216858 688 ntBASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf38bQ80SY5 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 Gm11745-201ENSMUST00000121669 448 ntBASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 Gm43433-201ENSMUST00000196573 481 ntBASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf38bQ80SY5 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Gm10253-201ENSMUST00000194270 940 ntBASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Gm18187-201ENSMUST00000196476 984 ntBASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Gm43125-201ENSMUST00000201724 730 ntBASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Gm18622-201ENSMUST00000219361 595 ntBASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf38bQ80SY5 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms