Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Gm22175-201ENSMUST00000175007 78 ntBASIC13.92□□□□□ -0.18
Pif1Q80SX8 Mir7023-201ENSMUST00000185093 64 ntBASIC13.92□□□□□ -0.18
Pif1Q80SX8 Gm18057-201ENSMUST00000208220 503 ntBASIC13.92□□□□□ -0.18
Pif1Q80SX8 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.92□□□□□ -0.18
Pif1Q80SX8 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.92□□□□□ -0.18
Pif1Q80SX8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pif1Q80SX8 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.92□□□□□ -0.18
Pif1Q80SX8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pif1Q80SX8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Rubie-203ENSMUST00000227803 2430 ntBASIC13.92□□□□□ -0.18
Pif1Q80SX8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pif1Q80SX8 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.92□□□□□ -0.18
Pif1Q80SX8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pif1Q80SX8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pif1Q80SX8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.91□□□□□ -0.18
Pif1Q80SX8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pif1Q80SX8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.91□□□□□ -0.18
Pif1Q80SX8 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.91□□□□□ -0.18
Pif1Q80SX8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.91□□□□□ -0.18
Pif1Q80SX8 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Gm7774-201ENSMUST00000200064 533 ntBASIC13.91□□□□□ -0.18
Pif1Q80SX8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.91□□□□□ -0.18
Pif1Q80SX8 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.91□□□□□ -0.18
Pif1Q80SX8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.91□□□□□ -0.18
Pif1Q80SX8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Pif1Q80SX8 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.91□□□□□ -0.18
Pif1Q80SX8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pif1Q80SX8 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Pif1Q80SX8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pif1Q80SX8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pif1Q80SX8 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.9□□□□□ -0.18
Pif1Q80SX8 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Gm27430-201ENSMUST00000184585 107 ntBASIC13.9□□□□□ -0.18
Pif1Q80SX8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Gm44333-201ENSMUST00000197168 107 ntBASIC13.9□□□□□ -0.18
Pif1Q80SX8 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Pif1Q80SX8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pif1Q80SX8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.89□□□□□ -0.19
Pif1Q80SX8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pif1Q80SX8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.89□□□□□ -0.19
Pif1Q80SX8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pif1Q80SX8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms