Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox11Q7M6Y2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox11Q7M6Y2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox11Q7M6Y2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox11Q7M6Y2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox11Q7M6Y2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Sox11Q7M6Y2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sox11Q7M6Y2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sox11Q7M6Y2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Gm18737-201ENSMUST00000173594 937 ntBASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Gm43438-201ENSMUST00000198133 379 ntBASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox11Q7M6Y2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Gm5866-201ENSMUST00000177881 973 ntBASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Gm8318-201ENSMUST00000182954 872 ntBASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox11Q7M6Y2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox11Q7M6Y2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox11Q7M6Y2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sox11Q7M6Y2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox11Q7M6Y2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.23■□□□□ 0.03
Sox11Q7M6Y2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox11Q7M6Y2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sox11Q7M6Y2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox11Q7M6Y2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox11Q7M6Y2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.23■□□□□ 0.03
Sox11Q7M6Y2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Sox11Q7M6Y2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox11Q7M6Y2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.23■□□□□ 0.03
Sox11Q7M6Y2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox11Q7M6Y2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox11Q7M6Y2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.23■□□□□ 0.03
Sox11Q7M6Y2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.23■□□□□ 0.03
Sox11Q7M6Y2 Gm5779-201ENSMUST00000218467 910 ntBASIC15.23■□□□□ 0.03
Sox11Q7M6Y2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms