Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Dhx40Q6PE54 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Dhx40Q6PE54 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Dhx40Q6PE54 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Dhx40Q6PE54 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Dhx40Q6PE54 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Dhx40Q6PE54 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Dhx40Q6PE54 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Dhx40Q6PE54 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.77■□□□□ 0.27
Dhx40Q6PE54 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Dhx40Q6PE54 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Dhx40Q6PE54 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Dhx40Q6PE54 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Dhx40Q6PE54 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Dhx40Q6PE54 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Gm17971-201ENSMUST00000190239 806 ntBASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Dhx40Q6PE54 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Dhx40Q6PE54 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms