Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf220Q6PDX6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf220Q6PDX6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rnf220Q6PDX6 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf220Q6PDX6 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.33□□□□□ -0.12
Rnf220Q6PDX6 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf220Q6PDX6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf220Q6PDX6 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf220Q6PDX6 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf220Q6PDX6 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rnf220Q6PDX6 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf220Q6PDX6 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf220Q6PDX6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rnf220Q6PDX6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf220Q6PDX6 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Rnf220Q6PDX6 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf220Q6PDX6 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf220Q6PDX6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf220Q6PDX6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf220Q6PDX6 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Gm26039-201ENSMUST00000158152 144 ntBASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.31□□□□□ -0.12
Rnf220Q6PDX6 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf220Q6PDX6 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms