Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Smarcc2Q6PDG5 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc2Q6PDG5 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc2Q6PDG5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Smarcc2Q6PDG5 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc2Q6PDG5 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc2Q6PDG5 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc2Q6PDG5 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.58■□□□□ 0.4
Smarcc2Q6PDG5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc2Q6PDG5 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc2Q6PDG5 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc2Q6PDG5 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc2Q6PDG5 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Smarcc2Q6PDG5 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcc2Q6PDG5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Smarcc2Q6PDG5 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc2Q6PDG5 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc2Q6PDG5 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Smarcc2Q6PDG5 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Smarcc2Q6PDG5 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc2Q6PDG5 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc2Q6PDG5 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.57■□□□□ 0.4
Smarcc2Q6PDG5 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.57■□□□□ 0.4
Smarcc2Q6PDG5 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.57■□□□□ 0.4
Smarcc2Q6PDG5 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Smarcc2Q6PDG5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.57■□□□□ 0.4
Smarcc2Q6PDG5 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc2Q6PDG5 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.57■□□□□ 0.4
Smarcc2Q6PDG5 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc2Q6PDG5 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc2Q6PDG5 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc2Q6PDG5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc2Q6PDG5 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Gm4899-201ENSMUST00000178708 719 ntBASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Gm8000-201ENSMUST00000188378 592 ntBASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc2Q6PDG5 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Gm11779-201ENSMUST00000118541 368 ntBASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc2Q6PDG5 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc2Q6PDG5 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc2Q6PDG5 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc2Q6PDG5 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.54■□□□□ 0.4
Smarcc2Q6PDG5 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
Smarcc2Q6PDG5 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc2Q6PDG5 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Smarcc2Q6PDG5 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc2Q6PDG5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc2Q6PDG5 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc2Q6PDG5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Smarcc2Q6PDG5 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc2Q6PDG5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.54■□□□□ 0.4
Smarcc2Q6PDG5 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc2Q6PDG5 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc2Q6PDG5 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms