Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Gm4459-201ENSMUST00000118750 468 ntBASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Gm27867-201ENSMUST00000184778 125 ntBASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd3Q6P9Z1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Gm27704-201ENSMUST00000185094 107 ntBASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd3Q6P9Z1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Smarcd3Q6P9Z1 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms