Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf6Q6NVF9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Gm10499-201ENSMUST00000174094 934 ntBASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf6Q6NVF9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Gm17971-201ENSMUST00000190239 806 ntBASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Rps4l-201ENSMUST00000071745 943 ntBASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.62□□□□□ -0.07
Cpsf6Q6NVF9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf6Q6NVF9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Cpsf6Q6NVF9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms