Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Scube3Q66PY1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.84■□□□□ 0.13
Scube3Q66PY1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scube3Q66PY1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scube3Q66PY1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scube3Q66PY1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scube3Q66PY1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.83■□□□□ 0.13
Scube3Q66PY1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Scube3Q66PY1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scube3Q66PY1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scube3Q66PY1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scube3Q66PY1 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Scube3Q66PY1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.83■□□□□ 0.12
Scube3Q66PY1 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scube3Q66PY1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scube3Q66PY1 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scube3Q66PY1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scube3Q66PY1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Scube3Q66PY1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scube3Q66PY1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Scube3Q66PY1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scube3Q66PY1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scube3Q66PY1 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scube3Q66PY1 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.83■□□□□ 0.12
Scube3Q66PY1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scube3Q66PY1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scube3Q66PY1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scube3Q66PY1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Scube3Q66PY1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.82■□□□□ 0.12
Scube3Q66PY1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.82■□□□□ 0.12
Scube3Q66PY1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.82■□□□□ 0.12
Scube3Q66PY1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scube3Q66PY1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.82■□□□□ 0.12
Scube3Q66PY1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scube3Q66PY1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scube3Q66PY1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scube3Q66PY1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scube3Q66PY1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scube3Q66PY1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scube3Q66PY1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scube3Q66PY1 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scube3Q66PY1 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.81■□□□□ 0.12
Scube3Q66PY1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scube3Q66PY1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.81■□□□□ 0.12
Scube3Q66PY1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scube3Q66PY1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Scube3Q66PY1 Gm38116-201ENSMUST00000193873 1533 ntBASIC15.81■□□□□ 0.12
Scube3Q66PY1 Gm2272-201ENSMUST00000194903 582 ntBASIC15.81■□□□□ 0.12
Scube3Q66PY1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scube3Q66PY1 Thap2-203ENSMUST00000218989 527 ntBASIC15.81■□□□□ 0.12
Scube3Q66PY1 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.81■□□□□ 0.12
Scube3Q66PY1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
Scube3Q66PY1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scube3Q66PY1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scube3Q66PY1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scube3Q66PY1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scube3Q66PY1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scube3Q66PY1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scube3Q66PY1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scube3Q66PY1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scube3Q66PY1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Scube3Q66PY1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.8■□□□□ 0.12
Scube3Q66PY1 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.8■□□□□ 0.12
Scube3Q66PY1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms