Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
VclQ64727 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.83□□□□□ -0.04
VclQ64727 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VclQ64727 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VclQ64727 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VclQ64727 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.83□□□□□ -0.04
VclQ64727 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.83□□□□□ -0.04
VclQ64727 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VclQ64727 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VclQ64727 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.83□□□□□ -0.04
VclQ64727 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
VclQ64727 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VclQ64727 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VclQ64727 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VclQ64727 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.82□□□□□ -0.04
VclQ64727 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Gm17271-201ENSMUST00000165535 355 ntBASIC14.82□□□□□ -0.04
VclQ64727 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.82□□□□□ -0.04
VclQ64727 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
VclQ64727 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.82□□□□□ -0.04
VclQ64727 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
VclQ64727 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
VclQ64727 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.82□□□□□ -0.04
VclQ64727 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VclQ64727 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
VclQ64727 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VclQ64727 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VclQ64727 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VclQ64727 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.81□□□□□ -0.04
VclQ64727 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VclQ64727 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VclQ64727 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VclQ64727 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VclQ64727 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
VclQ64727 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VclQ64727 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VclQ64727 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
VclQ64727 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VclQ64727 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.81□□□□□ -0.04
VclQ64727 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VclQ64727 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.81□□□□□ -0.04
VclQ64727 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VclQ64727 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VclQ64727 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VclQ64727 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VclQ64727 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VclQ64727 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VclQ64727 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VclQ64727 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VclQ64727 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
VclQ64727 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.81□□□□□ -0.04
VclQ64727 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VclQ64727 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
VclQ64727 Asic1-205ENSMUST00000228185 1818 ntBASIC14.8□□□□□ -0.04
VclQ64727 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VclQ64727 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.8□□□□□ -0.04
VclQ64727 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.8□□□□□ -0.04
VclQ64727 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VclQ64727 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VclQ64727 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.8□□□□□ -0.04
VclQ64727 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
VclQ64727 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VclQ64727 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VclQ64727 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VclQ64727 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
VclQ64727 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.8□□□□□ -0.04
VclQ64727 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VclQ64727 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.8□□□□□ -0.04
VclQ64727 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VclQ64727 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.8□□□□□ -0.04
VclQ64727 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VclQ64727 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VclQ64727 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms