Protein–RNA interactions for Protein: Q64131

Runx3, Runt-related transcription factor 3, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Runx3Q64131 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Runx3Q64131 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.23■□□□□ 0.03
Runx3Q64131 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.23■□□□□ 0.03
Runx3Q64131 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 Gm27989-201ENSMUST00000184721 107 ntBASIC15.23■□□□□ 0.03
Runx3Q64131 Gm28630-201ENSMUST00000187806 498 ntBASIC15.23■□□□□ 0.03
Runx3Q64131 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.23■□□□□ 0.03
Runx3Q64131 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.23■□□□□ 0.03
Runx3Q64131 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Runx3Q64131 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Runx3Q64131 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Runx3Q64131 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Runx3Q64131 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Runx3Q64131 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Runx3Q64131 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Runx3Q64131 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Runx3Q64131 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Runx3Q64131 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Runx3Q64131 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Runx3Q64131 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Runx3Q64131 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Runx3Q64131 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.22■□□□□ 0.03
Runx3Q64131 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.22■□□□□ 0.03
Runx3Q64131 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.22■□□□□ 0.03
Runx3Q64131 Gm25144-201ENSMUST00000179561 110 ntBASIC15.22■□□□□ 0.03
Runx3Q64131 Gm25352-201ENSMUST00000179815 110 ntBASIC15.22■□□□□ 0.03
Runx3Q64131 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.22■□□□□ 0.03
Runx3Q64131 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Runx3Q64131 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Runx3Q64131 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Runx3Q64131 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Runx3Q64131 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Runx3Q64131 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Runx3Q64131 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Runx3Q64131 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.22■□□□□ 0.03
Runx3Q64131 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Runx3Q64131 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.22■□□□□ 0.03
Runx3Q64131 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Runx3Q64131 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Runx3Q64131 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.22■□□□□ 0.03
Runx3Q64131 Prob1-201ENSMUST00000097619 3021 ntBASIC15.22■□□□□ 0.03
Runx3Q64131 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Runx3Q64131 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Runx3Q64131 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Runx3Q64131 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Runx3Q64131 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Runx3Q64131 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Runx3Q64131 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Runx3Q64131 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Runx3Q64131 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Runx3Q64131 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.21■□□□□ 0.03
Runx3Q64131 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Runx3Q64131 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.21■□□□□ 0.03
Runx3Q64131 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.21■□□□□ 0.03
Runx3Q64131 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.21■□□□□ 0.03
Runx3Q64131 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Runx3Q64131 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Runx3Q64131 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Runx3Q64131 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Runx3Q64131 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Runx3Q64131 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Runx3Q64131 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Runx3Q64131 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Runx3Q64131 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Runx3Q64131 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Runx3Q64131 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Runx3Q64131 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Runx3Q64131 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Runx3Q64131 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Runx3Q64131 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Runx3Q64131 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Runx3Q64131 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Runx3Q64131 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Runx3Q64131 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Runx3Q64131 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.2■□□□□ 0.02
Runx3Q64131 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.2■□□□□ 0.02
Runx3Q64131 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.2■□□□□ 0.02
Runx3Q64131 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms