Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Notch3Q61982 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Notch3Q61982 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.63□□□□□ -0.55
Notch3Q61982 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Notch3Q61982 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Notch3Q61982 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.63□□□□□ -0.55
Notch3Q61982 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Notch3Q61982 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.63□□□□□ -0.55
Notch3Q61982 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Notch3Q61982 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Notch3Q61982 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC11.62□□□□□ -0.55
Notch3Q61982 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Gm15427-201ENSMUST00000117288 531 ntBASIC11.62□□□□□ -0.55
Notch3Q61982 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.62□□□□□ -0.55
Notch3Q61982 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.62□□□□□ -0.55
Notch3Q61982 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.62□□□□□ -0.55
Notch3Q61982 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Notch3Q61982 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Notch3Q61982 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.62□□□□□ -0.55
Notch3Q61982 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC11.62□□□□□ -0.55
Notch3Q61982 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.62□□□□□ -0.55
Notch3Q61982 Gm45412-201ENSMUST00000210217 2275 ntBASIC11.62□□□□□ -0.55
Notch3Q61982 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Notch3Q61982 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.62□□□□□ -0.55
Notch3Q61982 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Notch3Q61982 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Mir6977-201ENSMUST00000184960 64 ntBASIC11.61□□□□□ -0.55
Notch3Q61982 Gm43767-201ENSMUST00000198933 381 ntBASIC11.61□□□□□ -0.55
Notch3Q61982 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Notch3Q61982 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Notch3Q61982 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.61□□□□□ -0.55
Notch3Q61982 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Notch3Q61982 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.61□□□□□ -0.55
Notch3Q61982 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Notch3Q61982 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.61□□□□□ -0.55
Notch3Q61982 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.61□□□□□ -0.55
Notch3Q61982 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Gm11745-201ENSMUST00000121669 448 ntBASIC11.61□□□□□ -0.55
Notch3Q61982 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.61□□□□□ -0.55
Notch3Q61982 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.61□□□□□ -0.55
Notch3Q61982 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.61□□□□□ -0.55
Notch3Q61982 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Notch3Q61982 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Notch3Q61982 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Notch3Q61982 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.61□□□□□ -0.55
Notch3Q61982 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Notch3Q61982 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.61□□□□□ -0.55
Notch3Q61982 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Notch3Q61982 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.61□□□□□ -0.55
Notch3Q61982 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Notch3Q61982 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Notch3Q61982 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Notch3Q61982 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Notch3Q61982 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.6□□□□□ -0.55
Notch3Q61982 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Notch3Q61982 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms