Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.71■□□□□ 0.27
Ift88Q61371 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ift88Q61371 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ift88Q61371 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ift88Q61371 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.71■□□□□ 0.27
Ift88Q61371 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.71■□□□□ 0.27
Ift88Q61371 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ift88Q61371 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ift88Q61371 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ift88Q61371 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Ift88Q61371 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Ift88Q61371 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ift88Q61371 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ift88Q61371 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ift88Q61371 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ift88Q61371 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ift88Q61371 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ift88Q61371 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ift88Q61371 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ift88Q61371 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Ift88Q61371 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Ift88Q61371 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ift88Q61371 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ift88Q61371 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.7■□□□□ 0.26
Ift88Q61371 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ift88Q61371 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.7■□□□□ 0.26
Ift88Q61371 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ift88Q61371 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ift88Q61371 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ift88Q61371 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.7■□□□□ 0.26
Ift88Q61371 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ift88Q61371 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.7■□□□□ 0.26
Ift88Q61371 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.7■□□□□ 0.26
Ift88Q61371 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ift88Q61371 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ift88Q61371 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ift88Q61371 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ift88Q61371 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Ift88Q61371 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ift88Q61371 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ift88Q61371 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ift88Q61371 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ift88Q61371 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Ift88Q61371 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ift88Q61371 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
Ift88Q61371 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ift88Q61371 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ift88Q61371 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ift88Q61371 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ift88Q61371 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ift88Q61371 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Ift88Q61371 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.69■□□□□ 0.26
Ift88Q61371 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.69■□□□□ 0.26
Ift88Q61371 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Ift88Q61371 Gm12895-201ENSMUST00000122214 226 ntBASIC16.69■□□□□ 0.26
Ift88Q61371 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.69■□□□□ 0.26
Ift88Q61371 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Ift88Q61371 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ift88Q61371 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ift88Q61371 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ift88Q61371 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ift88Q61371 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.69■□□□□ 0.26
Ift88Q61371 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.69■□□□□ 0.26
Ift88Q61371 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ift88Q61371 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ift88Q61371 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ift88Q61371 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ift88Q61371 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ift88Q61371 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ift88Q61371 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ift88Q61371 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ift88Q61371 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ift88Q61371 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ift88Q61371 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.68■□□□□ 0.26
Ift88Q61371 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ift88Q61371 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms