Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Irf9Q61179 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Irf9Q61179 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Irf9Q61179 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Irf9Q61179 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Irf9Q61179 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Irf9Q61179 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Irf9Q61179 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Irf9Q61179 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Irf9Q61179 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Irf9Q61179 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Irf9Q61179 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.71■□□□□ 0.59
Irf9Q61179 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC18.71■□□□□ 0.59
Irf9Q61179 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Irf9Q61179 Gm18737-201ENSMUST00000173594 937 ntBASIC18.71■□□□□ 0.59
Irf9Q61179 Gm27920-201ENSMUST00000183953 96 ntBASIC18.71■□□□□ 0.59
Irf9Q61179 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.71■□□□□ 0.59
Irf9Q61179 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC18.71■□□□□ 0.59
Irf9Q61179 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC18.71■□□□□ 0.59
Irf9Q61179 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.71■□□□□ 0.59
Irf9Q61179 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.71■□□□□ 0.59
Irf9Q61179 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Irf9Q61179 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Irf9Q61179 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Irf9Q61179 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Irf9Q61179 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.71■□□□□ 0.59
Irf9Q61179 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Irf9Q61179 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Irf9Q61179 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Irf9Q61179 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Irf9Q61179 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Irf9Q61179 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Irf9Q61179 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Irf9Q61179 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf9Q61179 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Irf9Q61179 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf9Q61179 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Irf9Q61179 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Irf9Q61179 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Irf9Q61179 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf9Q61179 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Irf9Q61179 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.7■□□□□ 0.58
Irf9Q61179 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf9Q61179 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Irf9Q61179 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf9Q61179 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf9Q61179 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Irf9Q61179 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Irf9Q61179 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Irf9Q61179 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Irf9Q61179 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Irf9Q61179 Gm24158-201ENSMUST00000175263 71 ntBASIC18.7■□□□□ 0.58
Irf9Q61179 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Irf9Q61179 Gm10576-201ENSMUST00000191927 825 ntBASIC18.7■□□□□ 0.58
Irf9Q61179 Gm10253-201ENSMUST00000194270 940 ntBASIC18.7■□□□□ 0.58
Irf9Q61179 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.7■□□□□ 0.58
Irf9Q61179 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf9Q61179 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf9Q61179 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf9Q61179 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Irf9Q61179 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf9Q61179 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf9Q61179 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Irf9Q61179 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Irf9Q61179 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.7■□□□□ 0.58
Irf9Q61179 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Irf9Q61179 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf9Q61179 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Irf9Q61179 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf9Q61179 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf9Q61179 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf9Q61179 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf9Q61179 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Irf9Q61179 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf9Q61179 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.69■□□□□ 0.58
Irf9Q61179 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Irf9Q61179 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf9Q61179 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf9Q61179 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf9Q61179 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Irf9Q61179 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf9Q61179 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf9Q61179 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf9Q61179 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf9Q61179 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf9Q61179 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf9Q61179 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Irf9Q61179 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf9Q61179 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Irf9Q61179 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf9Q61179 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf9Q61179 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf9Q61179 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.68■□□□□ 0.58
Irf9Q61179 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
Irf9Q61179 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf9Q61179 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf9Q61179 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf9Q61179 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf9Q61179 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf9Q61179 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms