Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.37□□□□□ -0.11
Nr1h4Q60641 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.37□□□□□ -0.11
Nr1h4Q60641 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr1h4Q60641 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nr1h4Q60641 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr1h4Q60641 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nr1h4Q60641 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nr1h4Q60641 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.37□□□□□ -0.11
Nr1h4Q60641 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Nr1h4Q60641 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr1h4Q60641 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nr1h4Q60641 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Gm12497-201ENSMUST00000138778 237 ntBASIC14.36□□□□□ -0.11
Nr1h4Q60641 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Gm18622-201ENSMUST00000219361 595 ntBASIC14.36□□□□□ -0.11
Nr1h4Q60641 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1h4Q60641 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nr1h4Q60641 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr1h4Q60641 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.35□□□□□ -0.11
Nr1h4Q60641 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.35□□□□□ -0.11
Nr1h4Q60641 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1h4Q60641 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.35□□□□□ -0.11
Nr1h4Q60641 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.35□□□□□ -0.11
Nr1h4Q60641 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Nr1h4Q60641 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.35□□□□□ -0.11
Nr1h4Q60641 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.35□□□□□ -0.11
Nr1h4Q60641 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.35□□□□□ -0.11
Nr1h4Q60641 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Nr1h4Q60641 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Gm15165-201ENSMUST00000118140 502 ntBASIC14.34□□□□□ -0.11
Nr1h4Q60641 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1h4Q60641 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.34□□□□□ -0.11
Nr1h4Q60641 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms