Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Prdm1Q60636 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prdm1Q60636 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Prdm1Q60636 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prdm1Q60636 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.61■□□□□ 0.41
Prdm1Q60636 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.61■□□□□ 0.41
Prdm1Q60636 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prdm1Q60636 Mir3113-201ENSMUST00000175478 76 ntBASIC17.61■□□□□ 0.41
Prdm1Q60636 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.61■□□□□ 0.41
Prdm1Q60636 Gm44492-201ENSMUST00000197012 141 ntBASIC17.61■□□□□ 0.41
Prdm1Q60636 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prdm1Q60636 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prdm1Q60636 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prdm1Q60636 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prdm1Q60636 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Prdm1Q60636 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prdm1Q60636 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prdm1Q60636 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prdm1Q60636 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prdm1Q60636 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prdm1Q60636 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prdm1Q60636 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prdm1Q60636 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prdm1Q60636 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prdm1Q60636 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prdm1Q60636 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prdm1Q60636 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prdm1Q60636 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prdm1Q60636 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prdm1Q60636 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.6■□□□□ 0.41
Prdm1Q60636 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prdm1Q60636 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prdm1Q60636 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Prdm1Q60636 Gm10175-201ENSMUST00000086013 645 ntBASIC17.6■□□□□ 0.41
Prdm1Q60636 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.6■□□□□ 0.41
Prdm1Q60636 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.6■□□□□ 0.41
Prdm1Q60636 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prdm1Q60636 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prdm1Q60636 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prdm1Q60636 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prdm1Q60636 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prdm1Q60636 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Prdm1Q60636 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prdm1Q60636 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Prdm1Q60636 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prdm1Q60636 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prdm1Q60636 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prdm1Q60636 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prdm1Q60636 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prdm1Q60636 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prdm1Q60636 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prdm1Q60636 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Prdm1Q60636 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prdm1Q60636 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.59■□□□□ 0.41
Prdm1Q60636 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.59■□□□□ 0.41
Prdm1Q60636 Gm16198-201ENSMUST00000118766 670 ntBASIC17.59■□□□□ 0.41
Prdm1Q60636 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.59■□□□□ 0.41
Prdm1Q60636 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.59■□□□□ 0.41
Prdm1Q60636 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prdm1Q60636 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Prdm1Q60636 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prdm1Q60636 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.59■□□□□ 0.41
Prdm1Q60636 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.59■□□□□ 0.41
Prdm1Q60636 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.59■□□□□ 0.41
Prdm1Q60636 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.59■□□□□ 0.41
Prdm1Q60636 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prdm1Q60636 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prdm1Q60636 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prdm1Q60636 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prdm1Q60636 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prdm1Q60636 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prdm1Q60636 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prdm1Q60636 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.59■□□□□ 0.41
Prdm1Q60636 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prdm1Q60636 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prdm1Q60636 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prdm1Q60636 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prdm1Q60636 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Prdm1Q60636 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prdm1Q60636 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prdm1Q60636 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prdm1Q60636 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prdm1Q60636 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prdm1Q60636 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.58■□□□□ 0.4
Prdm1Q60636 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.58■□□□□ 0.4
Prdm1Q60636 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.58■□□□□ 0.4
Prdm1Q60636 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prdm1Q60636 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prdm1Q60636 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prdm1Q60636 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Prdm1Q60636 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
Prdm1Q60636 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Prdm1Q60636 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prdm1Q60636 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.57■□□□□ 0.4
Prdm1Q60636 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prdm1Q60636 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Prdm1Q60636 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.57■□□□□ 0.4
Prdm1Q60636 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.57■□□□□ 0.4
Prdm1Q60636 Gm9385-201ENSMUST00000117563 472 ntBASIC17.57■□□□□ 0.4
Prdm1Q60636 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms