Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 Psmb5-202ENSMUST00000227257 622 ntBASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Atp13a4Q5XF90 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atp13a4Q5XF90 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 Gm14140-201ENSMUST00000119999 995 ntBASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 Gm43767-201ENSMUST00000198933 381 ntBASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atp13a4Q5XF90 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atp13a4Q5XF90 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atp13a4Q5XF90 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Atp13a4Q5XF90 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atp13a4Q5XF90 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atp13a4Q5XF90 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atp13a4Q5XF90 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.27■□□□□ 0.2
Atp13a4Q5XF90 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atp13a4Q5XF90 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.27■□□□□ 0.2
Atp13a4Q5XF90 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.27■□□□□ 0.2
Atp13a4Q5XF90 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.27■□□□□ 0.2
Atp13a4Q5XF90 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.27■□□□□ 0.2
Atp13a4Q5XF90 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Atp13a4Q5XF90 Gm5364-201ENSMUST00000216789 889 ntBASIC16.27■□□□□ 0.2
Atp13a4Q5XF90 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atp13a4Q5XF90 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.27■□□□□ 0.2
Atp13a4Q5XF90 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atp13a4Q5XF90 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Atp13a4Q5XF90 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp13a4Q5XF90 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp13a4Q5XF90 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Atp13a4Q5XF90 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp13a4Q5XF90 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp13a4Q5XF90 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Atp13a4Q5XF90 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp13a4Q5XF90 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp13a4Q5XF90 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms