Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Scaf1Q5U4C3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.73
Scaf1Q5U4C3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Scaf1Q5U4C3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scaf1Q5U4C3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scaf1Q5U4C3 Gm43509-201ENSMUST00000196551 2594 ntBASIC19.58■□□□□ 0.73
Scaf1Q5U4C3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scaf1Q5U4C3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Scaf1Q5U4C3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scaf1Q5U4C3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Scaf1Q5U4C3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Scaf1Q5U4C3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Scaf1Q5U4C3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scaf1Q5U4C3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC19.58■□□□□ 0.72
Scaf1Q5U4C3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scaf1Q5U4C3 Shd-206ENSMUST00000225145 998 ntBASIC19.58■□□□□ 0.72
Scaf1Q5U4C3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scaf1Q5U4C3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.58■□□□□ 0.72
Scaf1Q5U4C3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Scaf1Q5U4C3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scaf1Q5U4C3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scaf1Q5U4C3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Scaf1Q5U4C3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Scaf1Q5U4C3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Scaf1Q5U4C3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scaf1Q5U4C3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Scaf1Q5U4C3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Scaf1Q5U4C3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scaf1Q5U4C3 Syt7-204ENSMUST00000223586 1344 ntBASIC19.57■□□□□ 0.72
Scaf1Q5U4C3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scaf1Q5U4C3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scaf1Q5U4C3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scaf1Q5U4C3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scaf1Q5U4C3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scaf1Q5U4C3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC19.57■□□□□ 0.72
Scaf1Q5U4C3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Scaf1Q5U4C3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Scaf1Q5U4C3 AC156016.3-201ENSMUST00000228623 344 ntBASIC19.57■□□□□ 0.72
Scaf1Q5U4C3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scaf1Q5U4C3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Scaf1Q5U4C3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Scaf1Q5U4C3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Scaf1Q5U4C3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf1Q5U4C3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf1Q5U4C3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf1Q5U4C3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf1Q5U4C3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf1Q5U4C3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf1Q5U4C3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf1Q5U4C3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC19.56■□□□□ 0.72
Scaf1Q5U4C3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf1Q5U4C3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Scaf1Q5U4C3 Gm28631-201ENSMUST00000190740 334 ntBASIC19.56■□□□□ 0.72
Scaf1Q5U4C3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf1Q5U4C3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf1Q5U4C3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf1Q5U4C3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf1Q5U4C3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf1Q5U4C3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Scaf1Q5U4C3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf1Q5U4C3 Gm5320-201ENSMUST00000207163 1519 ntBASIC19.56■□□□□ 0.72
Scaf1Q5U4C3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf1Q5U4C3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC19.55■□□□□ 0.72
Scaf1Q5U4C3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf1Q5U4C3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Scaf1Q5U4C3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf1Q5U4C3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.55■□□□□ 0.72
Scaf1Q5U4C3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Scaf1Q5U4C3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Scaf1Q5U4C3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf1Q5U4C3 Gm3436-201ENSMUST00000179930 840 ntBASIC19.55■□□□□ 0.72
Scaf1Q5U4C3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC19.55■□□□□ 0.72
Scaf1Q5U4C3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC19.55■□□□□ 0.72
Scaf1Q5U4C3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf1Q5U4C3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf1Q5U4C3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Scaf1Q5U4C3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf1Q5U4C3 Gm11839-201ENSMUST00000120647 1953 ntBASIC19.55■□□□□ 0.72
Scaf1Q5U4C3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC19.55■□□□□ 0.72
Scaf1Q5U4C3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf1Q5U4C3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf1Q5U4C3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Scaf1Q5U4C3 Gm15487-201ENSMUST00000122373 465 ntBASIC19.54■□□□□ 0.72
Scaf1Q5U4C3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Scaf1Q5U4C3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC19.54■□□□□ 0.72
Scaf1Q5U4C3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC19.54■□□□□ 0.72
Scaf1Q5U4C3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf1Q5U4C3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf1Q5U4C3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC19.54■□□□□ 0.72
Scaf1Q5U4C3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Scaf1Q5U4C3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf1Q5U4C3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf1Q5U4C3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf1Q5U4C3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf1Q5U4C3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf1Q5U4C3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf1Q5U4C3 Gm44616-201ENSMUST00000206417 1732 ntBASIC19.54■□□□□ 0.72
Scaf1Q5U4C3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf1Q5U4C3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Scaf1Q5U4C3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms