Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav8d-1Q5R1H8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trav8d-1Q5R1H8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav8d-1Q5R1H8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Trav8d-1Q5R1H8 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav8d-1Q5R1H8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.4□□□□□ -0.43
Trav8d-1Q5R1H8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trav8d-1Q5R1H8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav8d-1Q5R1H8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trav8d-1Q5R1H8 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.4□□□□□ -0.43
Trav8d-1Q5R1H8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Trav8d-1Q5R1H8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav8d-1Q5R1H8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8d-1Q5R1H8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms