Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav8d-2Q5R1B6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Gm14042-201ENSMUST00000120139 833 ntBASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Gm9908-201ENSMUST00000211534 448 ntBASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav8d-2Q5R1B6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Gm12138-201ENSMUST00000122180 951 ntBASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Gm42612-201ENSMUST00000197986 623 ntBASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Gm43170-201ENSMUST00000199827 612 ntBASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Gm43703-201ENSMUST00000200523 763 ntBASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Gm16476-201ENSMUST00000221544 139 ntBASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav8d-2Q5R1B6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
Trav8d-2Q5R1B6 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
Trav8d-2Q5R1B6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav8d-2Q5R1B6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav8d-2Q5R1B6 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.58□□□□□ -0.07
Trav8d-2Q5R1B6 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Gm22189-201ENSMUST00000103822 86 ntBASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Gm6222-201ENSMUST00000120787 396 ntBASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Gm8602-201ENSMUST00000184045 607 ntBASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Gm45668-201ENSMUST00000211271 493 ntBASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Dupd1-202ENSMUST00000224735 548 ntBASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav8d-2Q5R1B6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav8d-2Q5R1B6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms