Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Bbof1Q3V079 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.58■□□□□ 0.25
Bbof1Q3V079 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Mir5131-201ENSMUST00000175426 93 ntBASIC16.58■□□□□ 0.24
Bbof1Q3V079 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Gm6550-201ENSMUST00000187574 993 ntBASIC16.58■□□□□ 0.24
Bbof1Q3V079 Gm2651-201ENSMUST00000203560 838 ntBASIC16.58■□□□□ 0.24
Bbof1Q3V079 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Bbof1Q3V079 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Bbof1Q3V079 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.57■□□□□ 0.24
Bbof1Q3V079 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.57■□□□□ 0.24
Bbof1Q3V079 Gm27646-201ENSMUST00000183989 110 ntBASIC16.57■□□□□ 0.24
Bbof1Q3V079 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.57■□□□□ 0.24
Bbof1Q3V079 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Bbof1Q3V079 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Bbof1Q3V079 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.56■□□□□ 0.24
Bbof1Q3V079 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Gm15358-201ENSMUST00000119249 520 ntBASIC16.56■□□□□ 0.24
Bbof1Q3V079 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
Bbof1Q3V079 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.56■□□□□ 0.24
Bbof1Q3V079 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.56■□□□□ 0.24
Bbof1Q3V079 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.56■□□□□ 0.24
Bbof1Q3V079 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Bbof1Q3V079 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Bbof1Q3V079 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.55■□□□□ 0.24
Bbof1Q3V079 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Bbof1Q3V079 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.55■□□□□ 0.24
Bbof1Q3V079 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Bbof1Q3V079 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Bbof1Q3V079 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Bbof1Q3V079 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Bbof1Q3V079 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Bbof1Q3V079 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.55■□□□□ 0.24
Bbof1Q3V079 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.55■□□□□ 0.24
Bbof1Q3V079 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Bbof1Q3V079 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Bbof1Q3V079 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Bbof1Q3V079 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Bbof1Q3V079 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms