Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shisa3Q3UPR0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Gm18669-201ENSMUST00000216049 778 ntBASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.03□□□□□ -0.32
Shisa3Q3UPR0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.02□□□□□ -0.32
Shisa3Q3UPR0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Shisa3Q3UPR0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shisa3Q3UPR0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shisa3Q3UPR0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shisa3Q3UPR0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shisa3Q3UPR0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shisa3Q3UPR0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shisa3Q3UPR0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Shisa3Q3UPR0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa3Q3UPR0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.02□□□□□ -0.33
Shisa3Q3UPR0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa3Q3UPR0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Shisa3Q3UPR0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.02□□□□□ -0.33
Shisa3Q3UPR0 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa3Q3UPR0 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa3Q3UPR0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa3Q3UPR0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Shisa3Q3UPR0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa3Q3UPR0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa3Q3UPR0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa3Q3UPR0 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa3Q3UPR0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa3Q3UPR0 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Shisa3Q3UPR0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.02□□□□□ -0.33
Shisa3Q3UPR0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa3Q3UPR0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa3Q3UPR0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa3Q3UPR0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Shisa3Q3UPR0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shisa3Q3UPR0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Gm12008-201ENSMUST00000117791 755 ntBASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Shisa3Q3UPR0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms