Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Upf3aQ3ULJ3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Gm5745-201ENSMUST00000183748 313 ntBASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Upf3aQ3ULJ3 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 Gm43767-201ENSMUST00000198933 381 ntBASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 Dancr-204ENSMUST00000132389 2347 ntBASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Upf3aQ3ULJ3 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Gm9063-201ENSMUST00000223299 582 ntBASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Gm2423-201ENSMUST00000074863 733 ntBASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upf3aQ3ULJ3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms