Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Sf3b2Q3UJB0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC19.36■□□□□ 0.69
Sf3b2Q3UJB0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Sf3b2Q3UJB0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.36■□□□□ 0.69
Sf3b2Q3UJB0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3b2Q3UJB0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
Sf3b2Q3UJB0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Sf3b2Q3UJB0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Sf3b2Q3UJB0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19.35■□□□□ 0.69
Sf3b2Q3UJB0 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC19.35■□□□□ 0.69
Sf3b2Q3UJB0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3b2Q3UJB0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3b2Q3UJB0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Sf3b2Q3UJB0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Sf3b2Q3UJB0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Sf3b2Q3UJB0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC19.35■□□□□ 0.69
Sf3b2Q3UJB0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3b2Q3UJB0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Sf3b2Q3UJB0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3b2Q3UJB0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3b2Q3UJB0 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3b2Q3UJB0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Sf3b2Q3UJB0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3b2Q3UJB0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sf3b2Q3UJB0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3b2Q3UJB0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Gm27631-201ENSMUST00000184163 466 ntBASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b2Q3UJB0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Sf3b2Q3UJB0 Gm9200-201ENSMUST00000118513 1354 ntBASIC19.33■□□□□ 0.69
Sf3b2Q3UJB0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sf3b2Q3UJB0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Sf3b2Q3UJB0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Sf3b2Q3UJB0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sf3b2Q3UJB0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sf3b2Q3UJB0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sf3b2Q3UJB0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sf3b2Q3UJB0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm29310-201ENSMUST00000185468 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm21825-201ENSMUST00000185728 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm29109-201ENSMUST00000185895 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm21896-201ENSMUST00000186520 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm21873-201ENSMUST00000186728 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm21794-201ENSMUST00000187056 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm21880-201ENSMUST00000187275 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm21826-201ENSMUST00000187451 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm21198-201ENSMUST00000188393 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm21749-201ENSMUST00000189343 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm21901-201ENSMUST00000189568 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm29424-201ENSMUST00000189716 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm28599-201ENSMUST00000189838 694 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm21867-201ENSMUST00000189917 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm29269-201ENSMUST00000190087 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm21722-201ENSMUST00000190153 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm28423-201ENSMUST00000190701 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm21899-201ENSMUST00000190745 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm21910-201ENSMUST00000191163 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm21849-201ENSMUST00000191571 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm28678-201ENSMUST00000191593 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm20910-201ENSMUST00000193268 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Gm21871-201ENSMUST00000194621 696 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 AC154171.1-201ENSMUST00000224610 643 ntBASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3b2Q3UJB0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms