Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Gm7230-201ENSMUST00000173026 815 ntBASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Brf2Q3UAW9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Celf4-206ENSMUST00000224553 1729 ntBASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Gm9682-201ENSMUST00000197505 556 ntBASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Gm7787-201ENSMUST00000216858 688 ntBASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Brf2Q3UAW9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Brf2Q3UAW9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Brf2Q3UAW9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Gm5682-201ENSMUST00000173402 505 ntBASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Mir8098-201ENSMUST00000184011 137 ntBASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Gm6550-201ENSMUST00000187574 993 ntBASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Brf2Q3UAW9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Brf2Q3UAW9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf2Q3UAW9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Brf2Q3UAW9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.19□□□□□ -0.14
Brf2Q3UAW9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.19□□□□□ -0.14
Brf2Q3UAW9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf2Q3UAW9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf2Q3UAW9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf2Q3UAW9 Gm11764-201ENSMUST00000120221 623 ntBASIC14.19□□□□□ -0.14
Brf2Q3UAW9 Gm11452-201ENSMUST00000122376 690 ntBASIC14.19□□□□□ -0.14
Brf2Q3UAW9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf2Q3UAW9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.19□□□□□ -0.14
Brf2Q3UAW9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Brf2Q3UAW9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.19□□□□□ -0.14
Brf2Q3UAW9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Brf2Q3UAW9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf2Q3UAW9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf2Q3UAW9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Brf2Q3UAW9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf2Q3UAW9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Brf2Q3UAW9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Brf2Q3UAW9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Brf2Q3UAW9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.18□□□□□ -0.14
Brf2Q3UAW9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms