Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Chrna5Q2MKA5 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Celf4-206ENSMUST00000224553 1729 ntBASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Gm22189-201ENSMUST00000103822 86 ntBASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Gm9908-201ENSMUST00000211534 448 ntBASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Dupd1-202ENSMUST00000224735 548 ntBASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Gm20445-201ENSMUST00000061905 565 ntBASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Chrna5Q2MKA5 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Gm45384-201ENSMUST00000210451 277 ntBASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Gm16476-201ENSMUST00000221544 139 ntBASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Chrna5Q2MKA5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Chrna5Q2MKA5 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Chrna5Q2MKA5 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna5Q2MKA5 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.79■□□□□ 0.44
Chrna5Q2MKA5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna5Q2MKA5 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Chrna5Q2MKA5 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna5Q2MKA5 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chrna5Q2MKA5 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.79■□□□□ 0.44
Chrna5Q2MKA5 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms